Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819431.1_cds_XP_016500057.1_13921
CDS Infomation

[gene=LOC107818540] [db_xref=GeneID:107818540] [protein=pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like] [protein_id=XP_016500057.1] [location=complement(join(29476..30528,31986..33095))] [gbkey=CDS]
Sequence

ATGAATATGAAGCACTTAATGTCCAAACAAACTATCAACAATCTGTCAAAGCTCAATGGT
ACCATAAGAATTCTATCTCAATACCCCCATTTTCACCAGAATGCTCCGATCACTACATCC
TCCATGACACCTTCCATCTGTTCGACGAAGTGTCCCACTGATCTTTTCCAACCCCAAAAT
CCAAAATTTCGAAAAATGGAATCTTGGGGCAGTAAAAGATTCGTTCACACAGCTGAAGAA
ATGGTAAGCGAGTCAGAAACCGAGTCAGAGGATGATGCCACAATGAACGATTTCCTGTCG
AGATTTGTTTGGATAATGCGTGGAAAGCTGGTTGAAGTGTATCCAGATTTTGAGAAGAAA
ACAATTGATGGGATGCTTTTGGTTATTGTGGGGAAGGTTGTATCTGAGCTGGAAAAGGGT
GGTTTTGATCAGATGATGGGGTCCGCAGTGGCGGCATCAGAAGATTTTAGTGAGGATTTA
TGGAAGACAGTGTGGGAGGTGAGCAATGTGGTGTTGGAAGATATGGAGAAAGCAAAAAGG
AAGGAGAAAATGAAGAACTTTCTTCAAGCTGAGGAAGTTAAGGAGATGTGTAGGTTTGCA
GGTGAAGTGGGTATACGCGGAGACATGCTTAGGGAGTATAGGTTCAAATGGGCACGTGAG
AAGATGGAGGAGAGTGAGTTTTATCAGAGTCTTGAACGTCTTAAGGAAGAGGAAGAAAGA
TCAGCTCAAGAGGGGAGCTCATATGGTGGTATTGGGGCCATGGCCGTGGAGCAGGACAGT
GTTGGTGCAGAGGAGGAGCCTAAAGTTGTGTCTCTTCCGAAAAGGCGTGGGAAGCTTAAC
TACAAGATTTATGGACTTGATTTGTCCAATTCAAAATGGTCTGAAGTGGCTGATAAGATT
CATGAAGCTGAAAAAATCATATGGCCTCAAGAACCAAAACCAATAGCTGGCAAGTGCAAA
ATTGTTACTGACAAAATCCTTGCTTCACAAAAGGAAGATGATGCCTCTCTACTTCTAGCT
GAGTGGGTAGAACTTCTCCAACCTACCAGGGTAGACTGGATCAATTTACTTGATAGATTG
AAGGAACGAAATCCTCATCTATATTTGAAGATTGCAGAACATGTGCTTGGTGAAGAGTCC
TTCCAAACAAACATACGTGACTACTCCAAACTCATTGATGCCCATGCTAGAGACAACCGC
CTAACAGATGCTGAAAGAATTATCAAAAAGATGAGTGAAAATGGAATTGTACCTGATATT
CTCACATCAACAACCATGGTTCACATGTACAGTAAAGCAGGTGATTTGGATCAGGCAAAA
GCTGCATTCGAAAGCATGAGGACTCAAGGATTCCTACCAGACATGGGAGTTTACAATTCC
ATGATCTTAGCCTATGTAAATGCTGGCGAACCAAAGTTGGGTGAATCATTGATGAGGGAA
ATGGAGGCAAGAGACATCAAGCCCTCTAAGGAGATCTTTATGACCCTCCTAAGGTCATTT
GCTCAGCGTGGTGATGTTAATGGAGCCCAAAGAATAGCAACTACAATGCAGTTTTCAGGG
TTTCAGCCCACATTAGAGTCATGTACATTACTTGTTGAGGCATTTGGCAAAGCTGGTGAC
CCTGATCAAGCAAGGCATAATTTTGATTACATGATTAAACTTGGGCACAAGCCAGATGAT
AGATGCACTGCTAGCATGATAGCAGCTTATGAGAAGAAGAACCTATTGGATAAAGCCTTA
AATCTTCTATTGGAGCTTGAGAAAGATGGTTTTGAGCCTGGGGTGGCTACTTACTCTGTT
TTGGTGGATTGGATGGGTAAAATGCAGCTAATTGATGAAGCTGAACAACTCTTGGATAAG
ATTGCTGAGCAGGGTGAGGCTCCTCCATTTAAGGTTCATATTAGTCTATGTGACATGTAT
GCAAGAGCTAATGCTGAGAAAAAGGCTCTTCAAGCTCTTGGAGTTTTGGAGGCCAAAAAG
GAGCAGTTGGGACCAGAAGAATTCGAGAGGATTATACAGTCACTTATAGCTGGTGGATTT
GTACAAGATGCTCAAAAGTTCCAAGGATTGATGGAAGCTCGGGGATTTACAGTATCCGAG
CAACTTAAAGTAACGCTCCAGGCATCTCAAACTTTTCTCCGCAGGAGACCATCTGTAAGA
TAA

Peptide Sequence

PEP ID

XP_016500057.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Nicotiana tabacum]
Sequence

MNMKHLMSKQTINNLSKLNGTIRILSQYPHFHQNAPITTSSMTPSICSTKCPTDLFQPQN
PKFRKMESWGSKRFVHTAEEMVSESETESEDDATMNDFLSRFVWIMRGKLVEVYPDFEKK
TIDGMLLVIVGKVVSELEKGGFDQMMGSAVAASEDFSEDLWKTVWEVSNVVLEDMEKAKR
KEKMKNFLQAEEVKEMCRFAGEVGIRGDMLREYRFKWAREKMEESEFYQSLERLKEEEER
SAQEGSSYGGIGAMAVEQDSVGAEEEPKVVSLPKRRGKLNYKIYGLDLSNSKWSEVADKI
HEAEKIIWPQEPKPIAGKCKIVTDKILASQKEDDASLLLAEWVELLQPTRVDWINLLDRL
KERNPHLYLKIAEHVLGEESFQTNIRDYSKLIDAHARDNRLTDAERIIKKMSENGIVPDI
LTSTTMVHMYSKAGDLDQAKAAFESMRTQGFLPDMGVYNSMILAYVNAGEPKLGESLMRE
MEARDIKPSKEIFMTLLRSFAQRGDVNGAQRIATTMQFSGFQPTLESCTLLVEAFGKAGD
PDQARHNFDYMIKLGHKPDDRCTASMIAAYEKKNLLDKALNLLLELEKDGFEPGVATYSV
LVDWMGKMQLIDEAEQLLDKIAEQGEAPPFKVHISLCDMYARANAEKKALQALGVLEAKK
EQLGPEEFERIIQSLIAGGFVQDAQKFQGLMEARGFTVSEQLKVTLQASQTFLRRRPSVR

Transcript Sequence

Gene sequence data has not been registered.